scviva.tools.harreman.datasets.load_slide_seq_human_lung_dataset

scviva.tools.harreman.datasets.load_slide_seq_human_lung_dataset#

scviva.tools.harreman.datasets.load_slide_seq_human_lung_dataset(sample=None, save_path='data/')[source]#

Load the human lung Slide-seq dataset (Liu et al.).

Parameters:
  • sample (str, optional) – Sample to load. One of “Puck_200727_08”, “Puck_200727_09”, “Puck_200727_10”, “Puck_220408_13”, “Puck_220408_14”, “Puck_220408_15”, “Puck_220408_20”. If None, loads the full combined dataset.

  • save_path (str, optional) – Path to save the downloaded dataset.

Returns:

adata – The loaded Slide-seq dataset.

Return type:

AnnData